STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF43460.1Two component transcriptional regulator, winged helix family. (230 aa)    
Predicted Functional Partners:
ABF43461.1
Histidine kinase.
  0.993
ABF42845.1
Periplasmic sensor signal transduction histidine kinase.
  0.982
ABF43562.1
Two component transcriptional regulator, winged helix family.
  
  
 
0.907
ABF42846.1
Two component transcriptional regulator, winged helix family.
  
  
 
0.905
ABF43059.1
PAS/PAC sensor hybrid histidine kinase.
 
 
0.885
ABF42504.1
Multi-sensor signal transduction histidine kinase.
 
 0.850
ABF43561.1
Periplasmic sensor signal transduction histidine kinase.
   0.832
ABF39315.1
Periplasmic sensor signal transduction histidine kinase.
 
   0.818
ABF42101.1
Periplasmic sensor signal transduction histidine kinase.
 
   0.814
ABF39479.1
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.810
Your Current Organism:
Koribacter versatilis
NCBI taxonomy Id: 204669
Other names: Acidobacteria bacterium Ellin345, C. Koribacter versatilis Ellin345, Candidatus Koribacter versatilis Ellin345, Koribacter versatilis Ellin345, bacterium Ellin345
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.