Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABF40022.1 | ABF40686.1 | Acid345_1019 | Acid345_1685 | Amidase. | Amidase; Belongs to the amidase family. | 0.926 |
ABF40022.1 | ABF41295.1 | Acid345_1019 | Acid345_2294 | Amidase. | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-like amidase. | 0.909 |
ABF40022.1 | asnS | Acid345_1019 | Acid345_4597 | Amidase. | asparaginyl-tRNA synthetase. | 0.568 |
ABF40022.1 | aspS | Acid345_1019 | Acid345_1204 | Amidase. | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.471 |
ABF40022.1 | gatB | Acid345_1019 | Acid345_4716 | Amidase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.947 |
ABF40022.1 | gatC | Acid345_1019 | Acid345_0499 | Amidase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.862 |
ABF40022.1 | gltX1 | Acid345_1019 | Acid345_0051 | Amidase. | glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.530 |
ABF40495.1 | asnS | Acid345_1493 | Acid345_4597 | Amidase; Belongs to the amidase family. | asparaginyl-tRNA synthetase. | 0.568 |
ABF40495.1 | aspS | Acid345_1493 | Acid345_1204 | Amidase; Belongs to the amidase family. | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.471 |
ABF40495.1 | gatB | Acid345_1493 | Acid345_4716 | Amidase; Belongs to the amidase family. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.967 |
ABF40495.1 | gatC | Acid345_1493 | Acid345_0499 | Amidase; Belongs to the amidase family. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.918 |
ABF40495.1 | gltX1 | Acid345_1493 | Acid345_0051 | Amidase; Belongs to the amidase family. | glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.587 |
ABF40686.1 | ABF40022.1 | Acid345_1685 | Acid345_1019 | Amidase; Belongs to the amidase family. | Amidase. | 0.926 |
ABF40686.1 | ABF41295.1 | Acid345_1685 | Acid345_2294 | Amidase; Belongs to the amidase family. | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-like amidase. | 0.925 |
ABF40686.1 | asnS | Acid345_1685 | Acid345_4597 | Amidase; Belongs to the amidase family. | asparaginyl-tRNA synthetase. | 0.568 |
ABF40686.1 | aspS | Acid345_1685 | Acid345_1204 | Amidase; Belongs to the amidase family. | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.471 |
ABF40686.1 | gatB | Acid345_1685 | Acid345_4716 | Amidase; Belongs to the amidase family. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.967 |
ABF40686.1 | gatC | Acid345_1685 | Acid345_0499 | Amidase; Belongs to the amidase family. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.913 |
ABF40686.1 | gltX1 | Acid345_1685 | Acid345_0051 | Amidase; Belongs to the amidase family. | glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.530 |
ABF41295.1 | ABF40022.1 | Acid345_2294 | Acid345_1019 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-like amidase. | Amidase. | 0.909 |
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