STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tar1Methyl-accepting chemotaxis protein II; Function of homologous gene experimentally demonstrated in an other organism; receptor. (572 aa)    
Predicted Functional Partners:
HEAR0155
CheW-like protein; Function of strongly homologous gene; regulator.
 
 0.987
cheW1
Chemotaxis protein CheW; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
  0.986
cheR
Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
 0.985
cheB
Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.984
cheD
Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
  0.977
cheA
Chemotaxis protein CheA; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 0.975
cheW2
Chemotaxis protein CheW; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
  0.972
cheW3
Chemotaxis protein CheW; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
  0.972
cheW4
Chemotaxis protein CheW; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
  0.972
HEAR0952
Putative chemotaxis protein CheA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 0.964
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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