STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsbAThiol:disulfide interchange protein dsbA precursor; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (219 aa)    
Predicted Functional Partners:
HEAR0094
Conserved hypothetical protein, putative cell division protein; Homologs of previously reported genes of unknown function.
 
    0.824
argS
Putative arginyl-tRNA synthetase (ArgS); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.757
arsC2b
Arsenate reductase; Function experimentally demonstrated in the studied strain; enzyme.
   
 
 0.732
HEAR1322
Conserved hypothetical protein, putative ArsC family; Homologs of previously reported genes of unknown function; Belongs to the ArsC family.
   
 
 0.732
arsC3a
Arsenate reductase; Function experimentally demonstrated in the studied strain; enzyme.
   
 
 0.732
HEAR3183
Putative thioredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the ArsC family.
   
 
 0.732
dsbB
Putative Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.
 
  
 0.683
bamE
Hypothetical protein, putative SmpA/OmlA domain; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.675
sspB
Stringent starvation protein B; Function of strongly homologous gene; phenotype.
  
   
 0.661
ftsB
Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
  
     0.633
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.