STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEAR0130Putative two-component response regulator containing CheY-like receiver; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (236 aa)    
Predicted Functional Partners:
HEAR0131
Putative two-component sensor kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
 
 0.931
HEAR0132
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.878
lpxC
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (UDP-3-O-acyl-GlcNAc deacetylase); Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.
 
      0.859
HEAR0129
Hypothetical protein, putative GTPase; No homology to any previously reported sequences.
       0.803
HEAR2519
Conserved hypothetical protein, sigma-54 interaction domain; Homologs of previously reported genes of unknown function.
 
      0.769
HEAR0189
Putative two component system, response regulator CheY-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
   0.717
tctD
Transcriptional regulatory protein TctD; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
 
   0.705
HEAR2743
Putative chemotaxis protein histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
0.704
ompR2
Transcriptional regulatory protein OmpR; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
 
   0.642
glnL
Nitrogen regulation protein NR(II); Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 
 0.617
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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