STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltJGlutamate/aspartate transport system permease protein gltJ; Function of homologous gene experimentally demonstrated in an other organism; transporter. (243 aa)    
Predicted Functional Partners:
gltL
Glutamate/aspartate transport ATP-binding protein gltL; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.999
gltI
Glutamate/aspartate periplasmic binding protein precursor; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.993
gltK
Glutamate/aspartate transport system permease protein gltK; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 
 
0.979
HEAR0224
Hypothetical protein; No homology to any previously reported sequences.
       0.639
pyrC
Dihydroorotase (DHOase); Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
     
 0.566
HEAR3108
Putative ABC-type transport system, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
     
 0.431
putA
Bifunctional protein putA: Proline dehydrogenase (Proline oxidase); Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
  
 0.426
HEAR0230
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.411
HEAR3294
Putative periplasmic dipeptide transport protein (Dipeptide-binding protein) (DBP) DppA-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
     
 0.409
gltB
Glutamate synthase [NADPH] large chain (NADPH-GOGAT); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
  
 0.405
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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