STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctPC4-dicarboxylate-binding periplasmic protein; Function of homologous gene experimentally demonstrated in an other organism; transporter. (339 aa)    
Predicted Functional Partners:
HEAR1468
Putative TRAP dicarboxylate transporter, DctM subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.853
HEAR1467
Putative Tripartite ATP-independent periplasmic transporter, DctQ component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.648
HEAR2682
Putative leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
    
 0.643
HEAR1001
Putative TRAP dicarboxylate transporter, DctM subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
     0.613
HEAR0104
Putative TRAP-type C4-dicarboxylate transport system, large permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.595
HEAR0412
Putative C4-dicarboxylate sensor protein DctS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
     0.594
HEAR1000
Putative TRAP dicarboxylate transporter-DctP subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 0.468
HEAR0415
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.425
dctR
C4-dicarboxylate transport transcriptional regulatory protein DctR; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
   
 0.418
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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