Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nirMCytochrome c-551 precursor (Cytochrome c551) (Cytochrome C8); Function of homologous gene experimentally demonstrated in an other organism; carrier. (102 aa)    
Predicted Functional Partners:
aoxD
Cytochrome c-552 precursor (Cytochrome c552); Function of strongly homologous gene; carrier.
  
  
 
0.910
HEAR0823
Cytochrome c2; Function of homologous gene experimentally demonstrated in an other organism; carrier.
    
 0.901
HEAR1482
Function of homologous gene experimentally demonstrated in an other organism; carrier.
    
 0.901
HEAR0736
Hypothetical protein; No homology to any previously reported sequences.
       0.599
HEAR0275
Putative Choline monooxygenase with Rieske [2Fe-2S] domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.463
HEAR1194
Putative cytochrome c (SoxX); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
  
  
 0.424
HEAR1188
Putative sulfite dehydrogenase SoxC precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.404
sorA
Sulfite:cytochrome c oxidoreductase subunit A; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 
 0.404
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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