Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
HEAR1066Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (225 aa)    
Predicted Functional Partners:
HEAR2204
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.559
HEAR0457
Conserved hypothetical protein, putative O-antigen polymerase; Homologs of previously reported genes of unknown function.
  
     0.527
HEAR1067
Putative ribosomal large subunit pseudouridine synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
       0.527
HEAR2205
Hypothetical protein; No homology to any previously reported sequences.
  
     0.452
HEAR1065
Putative Fe-S oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.405
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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