STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEAR1184Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (190 aa)    
Predicted Functional Partners:
HEAR1186
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.682
HEAR0342
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.636
HEAR1191
Putative sulfur oxidation protein SoxY; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.625
HEAR1195
Putative sulfur oxidation protein SoxB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the 5'-nucleotidase family.
 
     0.604
HEAR1185
Putative Beta lactamase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.591
HEAR1192
Putative sulfur oxidation protein SoxZ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.496
HEAR1198
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.496
HEAR1197
Putative SoxW family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
     0.458
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.