STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEAR1227Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (285 aa)    
Predicted Functional Partners:
folC
FolC bifunctional protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the folylpolyglutamate synthase family.
 
    0.887
HEAR1327
Conserved hypothetical protein, putative membrane protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
   
 0.731
HEAR0266
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.730
HEAR1228
Putative colicin V production protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.715
fliA
RNA polymerase sigma factor for flagellar operon (Sigma-F factor) (Sigma-27) (Sigma-28); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.
  
 
 0.703
HEAR2572
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.700
HEAR0860
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.694
HEAR2755
Putative exoribonuclease II; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
   
 0.687
HEAR0702
Conserved hypothetical protein, putative glycosyltransferase; Homologs of previously reported genes of unknown function.
  
   
 0.673
HEAR0170
Putative Rod shape-determining protein mreD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
 
     0.663
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.