STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
osmCHydroperoxide resistance protein OsmC; Function of strongly homologous gene; enzyme. (143 aa)    
Predicted Functional Partners:
HEAR1509
Putative DNA-binding ferritin-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process; Belongs to the Dps family.
 
  
 0.709
sdhB
Succinate dehydrogenase (ubiquinone), Fe-S protein; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
      
 0.640
rnhA
Ribonuclease HI (RNase HI); Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
      
 0.640
HEAR2524
Conserved hypothetical protein, putative stress response protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0337 (CsbD) family.
  
  
 0.612
HEAR3312
Putative 2,5-didehydrogluconate reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.601
katA
Catalase (hydroperoxidase II); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the catalase family.
  
  
 0.595
HEAR2413
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
  
 0.591
HEAR1249
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
    0.590
HEAR3351
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
    0.590
HEAR0895
Putative two-component system sensory histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
    0.589
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.