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bioF protein (Herminiimonas arsenicoxydans) - STRING interaction network
"bioF" - 8-amino-7-oxononanoate synthase in Herminiimonas arsenicoxydans
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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bioF8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl- [acyl-carrier protein] and L-alanine to produce 8-amino-7- oxononanoate (AON), [acyl-carrier protein], and carbon dioxide (388 aa)    
Predicted Functional Partners:
bioA
Evidence 2a - Function of homologous gene experimentally demonstrated in an other organism; Product type e - enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (448 aa)
 
  0.992
bioH
Carboxylesterase BioH (Biotin synthesis protein BioH); Evidence 2b - Function of strongly homologous gene; Product type e - enzyme (245 aa)
       
  0.989
HEAR1671
Malonyl-[acyl-carrier protein] O-methyltransferase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway (260 aa)
 
 
  0.920
bioD
ATP-dependent dethiobiotin synthetase BioD; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring (250 aa)
 
   
  0.917
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family (339 aa)
   
  0.897
HEAR2920
Malonyl-[acyl-carrier protein] O-methyltransferase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway (319 aa)
 
 
  0.859
aptA
Omega-amino acid-pyruvate aminotransferase; Evidence 2a - Function of homologous gene experimentally demonstrated in an other organism; Product type e - enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (440 aa)
 
   
  0.733
HEAR2983
Putative para-aminobenzoate synthase (Aminodeoxychorismate synthase) PabB; Evidence 3 - Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe - putative enzyme (617 aa)
   
   
  0.635
ribAB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (370 aa)
         
  0.631
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (363 aa)
   
   
  0.629
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, strain ULPAs1
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