Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
HEAR1734Conserved hypothetical protein, GGDEF domain; Homologs of previously reported genes of unknown function. (519 aa)    
Predicted Functional Partners:
HEAR0889
Putative two-component system sensory histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.912
HEAR0629
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
0.886
HEAR0929
Putative two-component response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
0.876
HEAR0896
Putative two-component sensor protein histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
 0.863
HEAR1453
Putative two-component sensor kinase (N part); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
  
 
 0.842
HEAR2987
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.817
HEAR1092
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
0.812
HEAR2417
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 
 0.792
HEAR2548
Putative metal-dependent phosphohydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.719
HEAR0895
Putative two-component system sensory histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.694
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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