STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEAR1957Putative acyl dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process. (151 aa)    
Predicted Functional Partners:
HEAR1958
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.756
HEAR2837
Putative bifunctionnal protein 3-hydroxyacyl-CoA dehydrogenase and dodecenoyl-CoA isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.741
katA
Catalase (hydroperoxidase II); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the catalase family.
   
 0.698
qor
Quinone oxidoreductase, NADPH-dependent; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.664
mucD
Peptidase S1; Function of strongly homologous gene; enzyme; Belongs to the peptidase S1C family.
    
  0.635
HEAR3056
Putative peptidase S1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase S1C family.
    
  0.635
HEAR1954
Enoyl-CoA hydratase/isomerase; Function of strongly homologous gene; enzyme.
 0.623
aidB
Isovaleryl CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.622
HEAR3318
Putative 2-nitropropane dioxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.577
etfD
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.573
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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