STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEAR2190Putative competence protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process. (552 aa)    
Predicted Functional Partners:
HEAR2221
Hypothetical protein; No homology to any previously reported sequences.
   
 0.975
HEAR0116
Putative DNA protecting protein DprA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process.
 
  
 0.880
HEAR2921
Putative amidophosphoribosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.849
pilD
Type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.781
HEAR2191
Hypothetical protein; No homology to any previously reported sequences.
       0.718
HEAR1952
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshG (pilus type IV); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
   
  
 0.686
pilC
Type 4 fimbrial assembly protein; Function of homologous gene experimentally demonstrated in an other organism; structure.
   
  
 0.686
HEAR2569
Conserved hypothetical protein, putative DNA-binding; Homologs of previously reported genes of unknown function.
  
  
 0.598
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
 
   
 0.587
HEAR0759
Putative Bacterial type II secretion system protein E; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
 0.576
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.