STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEAR2316Putative phage excisionase Bbp49; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (65 aa)    
Predicted Functional Partners:
HEAR2317
Putative integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin; Belongs to the 'phage' integrase family.
       0.782
HEAR2311
Hypothetical protein; No homology to any previously reported sequences.
       0.773
HEAR2312
Hypothetical protein; No homology to any previously reported sequences.
       0.773
HEAR2313
Hypothetical protein; No homology to any previously reported sequences.
       0.773
HEAR2314
Hypothetical protein; No homology to any previously reported sequences.
       0.773
HEAR2315
Hypothetical protein; No homology to any previously reported sequences.
       0.773
HEAR2307
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.563
HEAR2308
Putative phage-related exodeoxyribonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.563
HEAR2309
Conserved hypothetical protein, putative phage-related; Homologs of previously reported genes of unknown function.
       0.563
HEAR2310
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.563
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.