STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilCType 4 fimbrial assembly protein; Function of homologous gene experimentally demonstrated in an other organism; structure. (410 aa)    
Predicted Functional Partners:
pilB
Type 4 fimbrial assembly protein pilB; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
 
 0.984
pilD
Type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.974
HEAR0759
Putative Bacterial type II secretion system protein E; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.943
HEAR1953
Putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshE (pilus type IV); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.943
HEAR3125
Putative Type IV pilus assembly protein PilM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
 
 
 0.869
HEAR3121
Putative type IV pilus biogenesis secretin PilQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
 
 
 
 0.838
pilT1
Pilus retraction protein PilT; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
  
 0.821
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
       0.803
pilT3
Pilus retraction protein PilT; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
   
 0.792
pilT2
Pilus retraction protein PilT; Function of homologous gene experimentally demonstrated in an other organism; putative structure.
 
   
 0.792
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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