Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
HEAR3395Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (170 aa)    
Predicted Functional Partners:
HEAR3394
Conserved hypothetical protein, putative membrane; Homologs of previously reported genes of unknown function.
   
 0.991
HEAR3396
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.985
HEAR3397
Putative Thiamine biosynthesis lipoprotein ApbE-like precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
    0.955
HEAR3398
Putative oxidoreductase FAD/NAD(P)-binding, putative sulfite reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.880
HEAR3445
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
    0.700
exbD1
Biopolymer transport protein exbD1; Function of homologous gene experimentally demonstrated in an other organism; transporter.
   
    0.556
exbD2
Biopolymer transport protein (ExbD); Function of homologous gene experimentally demonstrated in an other organism; transporter.
   
    0.556
HEAR0319
Putative Periplasmic protein TonB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
    0.519
HEAR1619
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.519
HEAR3400
TonB-dependent receptor for iron transport; Function of homologous gene experimentally demonstrated in an other organism; receptor.
 
    0.465
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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