STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEAR3396Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (285 aa)    
Predicted Functional Partners:
HEAR3395
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.978
HEAR3394
Conserved hypothetical protein, putative membrane; Homologs of previously reported genes of unknown function.
 
   
 0.942
HEAR3397
Putative Thiamine biosynthesis lipoprotein ApbE-like precursor; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
    0.915
HEAR3398
Putative oxidoreductase FAD/NAD(P)-binding, putative sulfite reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.879
HEAR1156
Putative ABC-type Fe3+ transport system, periplasmic component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
   
    0.624
HEAR1619
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.531
HEAR3400
TonB-dependent receptor for iron transport; Function of homologous gene experimentally demonstrated in an other organism; receptor.
 
    0.498
HEAR0319
Putative Periplasmic protein TonB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
 0.453
HEAR3306
Putative exogenous ferric siderophore receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
     0.448
HEAR0142
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.435
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.