STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A33O_10538Unannotated protein. (235 aa)    
Predicted Functional Partners:
A33O_06657
Unannotated protein.
    
 0.836
A33O_06350
Unannotated protein; Belongs to the UbiA prenyltransferase family.
   
 0.700
A33O_05820
Unannotated protein.
    
 0.685
gcvP
Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.671
A33O_09294
Unannotated protein.
  
     0.629
A33O_06325
Unannotated protein.
     
 0.595
GCA_001696575_01370
Unannotated protein.
     
 0.595
GCA_001696575_00460
Unannotated protein.
     
 0.566
GCA_001696575_02093
Unannotated protein.
     
 0.566
A33O_17179
Unannotated protein; Belongs to the GcvT family.
     
 0.566
Your Current Organism:
Nitratireductor aquibiodomus
NCBI taxonomy Id: 204799
Other names: ATCC BAA-762, DSM 15645, JCM 21793, N. aquibiodomus, Nitratireductor aquibiodomus Labbe et al. 2004, strain NL21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.