STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A33O_12454Unannotated protein. (254 aa)    
Predicted Functional Partners:
gltA
Unannotated protein; Belongs to the citrate synthase family.
  
 0.944
glcB
Unannotated protein; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
 
 0.791
A33O_04770
Unannotated protein.
  
 
 0.769
A33O_22469
Unannotated protein; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 0.716
A33O_02443
Unannotated protein.
    
 0.689
A33O_08241
Unannotated protein.
    
 0.689
mdh
Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 0.675
A33O_00010
Unannotated protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.671
A33O_23224
Unannotated protein; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 0.670
GCA_001696575_00141
Unannotated protein.
   
 
 0.667
Your Current Organism:
Nitratireductor aquibiodomus
NCBI taxonomy Id: 204799
Other names: ATCC BAA-762, DSM 15645, JCM 21793, N. aquibiodomus, Nitratireductor aquibiodomus Labbe et al. 2004, strain NL21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.