STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001696575_02546Unannotated protein. (252 aa)    
Predicted Functional Partners:
A33O_06657
Unannotated protein.
  
 0.924
GCA_001696575_02547
Unannotated protein.
 
     0.807
GCA_001696575_01811
Unannotated protein.
  
 
  0.792
GCA_001696575_02548
Unannotated protein.
 
     0.792
A33O_10633
Unannotated protein.
     
 0.768
GCA_001696575_02529
Unannotated protein.
  
 
  0.721
A33O_05565
Unannotated protein.
  
     0.716
GCA_001696575_00140
Unannotated protein.
   
 0.693
A33O_09534
Unannotated protein.
   
 0.693
GCA_001696575_02549
Unannotated protein.
 
     0.681
Your Current Organism:
Nitratireductor aquibiodomus
NCBI taxonomy Id: 204799
Other names: ATCC BAA-762, DSM 15645, JCM 21793, N. aquibiodomus, Nitratireductor aquibiodomus Labbe et al. 2004, strain NL21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.