STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A33O_15713Unannotated protein. (725 aa)    
Predicted Functional Partners:
A33O_15718
Unannotated protein.
 
 
 0.955
A33O_01265
Unannotated protein.
   
  0.954
A33O_15708
Unannotated protein.
    0.919
A33O_17919
Unannotated protein.
 0.907
GCA_001696575_03763
Unannotated protein.
 0.869
A33O_20981
Unannotated protein.
 0.865
GCA_001696575_01775
Unannotated protein.
 
 0.796
A33O_08946
Unannotated protein.
 
 
 0.774
A33O_15698
Unannotated protein.
 
     0.752
A33O_11687
Unannotated protein.
 
 
 
0.711
Your Current Organism:
Nitratireductor aquibiodomus
NCBI taxonomy Id: 204799
Other names: ATCC BAA-762, DSM 15645, JCM 21793, N. aquibiodomus, Nitratireductor aquibiodomus Labbe et al. 2004, strain NL21
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.