Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A33O_00145 | A33O_00150 | GCA_001696575_03207 | GCA_001696575_03208 | Unannotated protein. | Unannotated protein. | 0.891 |
A33O_00145 | A33O_00160 | GCA_001696575_03207 | GCA_001696575_03210 | Unannotated protein. | Unannotated protein. | 0.430 |
A33O_00145 | fabZ | GCA_001696575_03207 | GCA_001696575_03212 | Unannotated protein. | Unannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.428 |
A33O_00145 | lpxA | GCA_001696575_03207 | GCA_001696575_03211 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.430 |
A33O_00145 | lpxB | GCA_001696575_03207 | GCA_001696575_03209 | Unannotated protein. | Unannotated protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.430 |
A33O_00145 | lpxD | GCA_001696575_03207 | GCA_001696575_03213 | Unannotated protein. | Unannotated protein; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.428 |
A33O_00150 | A33O_00145 | GCA_001696575_03208 | GCA_001696575_03207 | Unannotated protein. | Unannotated protein. | 0.891 |
A33O_00150 | A33O_00160 | GCA_001696575_03208 | GCA_001696575_03210 | Unannotated protein. | Unannotated protein. | 0.433 |
A33O_00150 | A33O_08781 | GCA_001696575_03208 | GCA_001696575_00576 | Unannotated protein. | Unannotated protein. | 0.708 |
A33O_00150 | A33O_09199 | GCA_001696575_03208 | GCA_001696575_02608 | Unannotated protein. | Unannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.645 |
A33O_00150 | A33O_19084 | GCA_001696575_03208 | GCA_001696575_01886 | Unannotated protein. | Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.491 |
A33O_00150 | fabZ | GCA_001696575_03208 | GCA_001696575_03212 | Unannotated protein. | Unannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.428 |
A33O_00150 | lpxA | GCA_001696575_03208 | GCA_001696575_03211 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.430 |
A33O_00150 | lpxB | GCA_001696575_03208 | GCA_001696575_03209 | Unannotated protein. | Unannotated protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.430 |
A33O_00150 | lpxD | GCA_001696575_03208 | GCA_001696575_03213 | Unannotated protein. | Unannotated protein; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.437 |
A33O_00150 | rpsA | GCA_001696575_03208 | GCA_001696575_02240 | Unannotated protein. | Unannotated protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.628 |
A33O_00160 | A33O_00145 | GCA_001696575_03210 | GCA_001696575_03207 | Unannotated protein. | Unannotated protein. | 0.430 |
A33O_00160 | A33O_00150 | GCA_001696575_03210 | GCA_001696575_03208 | Unannotated protein. | Unannotated protein. | 0.433 |
A33O_00160 | fabZ | GCA_001696575_03210 | GCA_001696575_03212 | Unannotated protein. | Unannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.812 |
A33O_00160 | lpxA | GCA_001696575_03210 | GCA_001696575_03211 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.950 |
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