STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A33O_03233Unannotated protein; Belongs to the precorrin methyltransferase family. (246 aa)    
Predicted Functional Partners:
A33O_03238
Unannotated protein.
 
 0.999
cobH
Unannotated protein.
 
 
 0.996
A33O_03258
Unannotated protein.
 
 
 0.986
A33O_03243
Unannotated protein.
 
 
 0.986
A33O_03248
Unannotated protein.
 
 
 0.984
A33O_03223
Unannotated protein.
 
 
 0.977
cobN
Unannotated protein.
 
  
 0.958
A33O_03253
Unannotated protein.
 
 
 0.955
cobQ
Unannotated protein; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.932
GCA_001696575_01529
Unannotated protein.
 
  
 0.852
Your Current Organism:
Nitratireductor aquibiodomus
NCBI taxonomy Id: 204799
Other names: ATCC BAA-762, DSM 15645, JCM 21793, N. aquibiodomus, Nitratireductor aquibiodomus Labbe et al. 2004, strain NL21
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