STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113136253Uncharacterized protein. (618 aa)    
Predicted Functional Partners:
eaf1
ELL associated factor 1.
    
 0.914
ENSMAMP00000029065
ELL associated factor 2.
    
 0.914
ENSMAMP00000028358
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
    
 0.902
polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.872
ENSMAMP00000001055
AF4/FMR2 family, member 2.
   
 0.851
ENSMAMP00000024075
Uncharacterized protein.
   
 0.851
aff4
AF4/FMR2 family, member 4.
   
 0.851
ENSMAMP00000011617
Interactor of little elongator complex ELL subunit 2.
    
 0.840
polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
    
 0.838
supt5h
Transcription elongation factor SPT5.
    
 0.821
Your Current Organism:
Mastacembelus armatus
NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.