STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMAMP00000005620Bromo domain-containing protein. (138 aa)    
Predicted Functional Partners:
ENSMAMP00000005582
Uncharacterized protein.
 
    
0.904
taf7l
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 
 0.797
ENSMAMP00000011911
E2F transcription factor 1.
    
 
 0.758
dmap1
DNA methyltransferase 1 associated protein 1.
    
 
 0.744
ENSMAMP00000021909
Nuclear receptor binding SET domain protein 3.
    
 
 0.721
jmjd6
Jumonji domain containing 6, arginine demethylase and lysine hydroxylase.
    
 
 0.719
ENSMAMP00000020474
Transcription initiation factor TFIID subunit.
    
 
0.717
ENSMAMP00000028358
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
    
 
 0.713
ENSMAMP00000007342
E1A binding protein p400.
   
 
 0.668
ENSMAMP00000010763
Snf2-related CREBBP activator protein.
   
 
 0.668
Your Current Organism:
Mastacembelus armatus
NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel
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