STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113144704Protocadherin 1 alpha 4. (852 aa)    
Predicted Functional Partners:
fjx1
Four-jointed box kinase 1.
   
 0.562
fat2
FAT atypical cadherin 2.
    
 
0.530
fat1
FAT atypical cadherin 1a.
    
 
0.530
LOC113134887
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
  0.478
ENSMAMP00000004589
Uncharacterized protein.
    
  0.478
ENSMAMP00000011250
Uridine-cytidine kinase 2a.
    
  0.478
LOC113126274
Uncharacterized protein.
    
  0.478
uckl1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
  0.478
LOC113128003
Junction plakoglobin a.
    
  0.478
uck1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
  0.478
Your Current Organism:
Mastacembelus armatus
NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.