STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113125394Crystallin, beta B1, like 3; Belongs to the beta/gamma-crystallin family. (209 aa)    
Predicted Functional Partners:
ENSMAMP00000023613
Intersectin 2a.
    
 0.918
ENSMAMP00000030403
Intersectin 2b.
    
 0.918
ENSMAMP00000014109
Intersectin 1 (SH3 domain protein).
    
 0.879
ENSMAMP00000027304
Uncharacterized protein.
   
 0.872
dock4
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
    
 0.869
ENSMAMP00000012044
SH3 and multiple ankyrin repeat domains 3a.
   
 0.865
ENSMAMP00000013564
Uncharacterized protein.
   
 0.865
ENSMAMP00000027874
Uncharacterized protein.
   
 0.865
ENSMAMP00000032315
SH3 and multiple ankyrin repeat domains 1.
   
 0.865
ENSMAMP00000002412
Nitric oxide synthase 1 (neuronal) adaptor protein b.
    
 0.820
Your Current Organism:
Mastacembelus armatus
NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel
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