STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCAGrancalcin. (314 aa)    
Predicted Functional Partners:
ENSMAMP00000028052
Uncharacterized protein.
   
 0.843
ENSMAMP00000028056
Uncharacterized protein.
   
 0.843
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.689
noa1
Nitric oxide associated 1.
     
 0.687
ENSMAMP00000007202
SEC31 homolog A, COPII coat complex component.
    
 
 0.605
ENSMAMP00000028423
SEC31 homolog B, COPII coat complex component.
    
 
 0.605
ankrd40
Ankyrin repeat domain 40.
    
 
 0.605
ENSMAMP00000000180
Calpain 3a, (p94); Belongs to the peptidase C2 family.
   
0.596
capn7
Calpain 7; Belongs to the peptidase C2 family.
   
 0.596
ENSMAMP00000001024
Calpain 9; Belongs to the peptidase C2 family.
   
0.596
Your Current Organism:
Mastacembelus armatus
NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.