STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113122474Uncharacterized protein. (346 aa)    
Predicted Functional Partners:
LOC113125942
Hes related family bHLH transcription factor with YRPW motif like.
  
  
 
0.838
hey1
Hes-related family bHLH transcription factor with YRPW motif 1.
  
  
 
0.836
hey2
Hes-related family bHLH transcription factor with YRPW motif 2.
  
  
 
0.834
ENSMAMP00000004793
FA complementation group F.
    
  0.667
ENSMAMP00000014870
FA complementation group L.
    
  0.667
ENSMAMP00000020344
FA complementation group G.
    
  0.667
fancc
FA complementation group C.
    
  0.667
rpl10a
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.623
fance
FA complementation group E.
    
  0.623
FANCA
FA complementation group A.
    
  0.575
Your Current Organism:
Mastacembelus armatus
NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel
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