STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMAMP00000025138Solute carrier family 22 member 13a. (400 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
     
 0.884
LOC113144213
Malate synthase-like.
   
 
 0.870
pla2g4a
Phospholipase A2.
    
 0.832
ints9
Integrator complex subunit 9.
    
 0.665
eef1g
Eukaryotic translation elongation factor 1 gamma.
    
 0.664
ints1
Integrator complex subunit 1.
    
 0.653
ints11
Integrator complex subunit 11.
    
 0.650
ints4
Integrator complex subunit 4.
    
 0.643
ints3
Integrator complex subunit 3.
    
 0.639
ints7
Integrator complex subunit 7.
    
 0.638
Your Current Organism:
Mastacembelus armatus
NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.