STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113128005Ubinuclein 2a. (1272 aa)    
Predicted Functional Partners:
ENSMAMP00000027304
Uncharacterized protein.
   
 0.724
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 0.648
slf1
SMC5-SMC6 complex localization factor 1.
   
 0.639
ENSMAMP00000010092
AT rich interactive domain 4A (RBP1-like).
    
 0.620
ENSMAMP00000025634
Translocase of outer mitochondrial membrane 20.
    
 0.620
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.603
ripk4
Receptor-interacting serine-threonine kinase 4.
   
 0.602
ENSMAMP00000014705
WD_REPEATS_REGION domain-containing protein.
   
 0.600
ENSMAMP00000014739
Uncharacterized protein.
   
 0.600
LOC113130945
Macrophage stimulating 1 receptor a.
    
  0.600
Your Current Organism:
Mastacembelus armatus
NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.