ENSMAMP00000029240 protein (Mastacembelus armatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSMAMP00000029240

Uncharacterized protein; Belongs to the peptidase C2 family. (696 aa)

Predicted Functional Partners:

ENSMAMP00000011919

0.866

LOC113124267

0.866

LOC113146397

0.866

ENSMAMP00000028052

0.852

ENSMAMP00000028056

0.852

LOC113121311

0.842

LOC113141659

0.841

bax

0.841

CAPN2

0.830

LOC113140156

0.830

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAPN2	ENSMAMP00000011919	ENSMAMP00000026283	ENSMAMP00000011919	Calpain 2, (m/II) large subunit, like; Belongs to the peptidase C2 family.	Talin 2b.	0.854
CAPN2	ENSMAMP00000028052	ENSMAMP00000026283	ENSMAMP00000028052	Calpain 2, (m/II) large subunit, like; Belongs to the peptidase C2 family.	Uncharacterized protein.	0.832
CAPN2	ENSMAMP00000028056	ENSMAMP00000026283	ENSMAMP00000028056	Calpain 2, (m/II) large subunit, like; Belongs to the peptidase C2 family.	Uncharacterized protein.	0.832
CAPN2	ENSMAMP00000029240	ENSMAMP00000026283	ENSMAMP00000029240	Calpain 2, (m/II) large subunit, like; Belongs to the peptidase C2 family.	Uncharacterized protein; Belongs to the peptidase C2 family.	0.830
CAPN2	LOC113121311	ENSMAMP00000026283	ENSMAMP00000030334	Calpain 2, (m/II) large subunit, like; Belongs to the peptidase C2 family.	Zgc:153993.	0.828
CAPN2	LOC113124267	ENSMAMP00000026283	ENSMAMP00000029550	Calpain 2, (m/II) large subunit, like; Belongs to the peptidase C2 family.	Talin 1.	0.854
CAPN2	LOC113141659	ENSMAMP00000026283	ENSMAMP00000000636	Calpain 2, (m/II) large subunit, like; Belongs to the peptidase C2 family.	Uncharacterized protein.	0.827
CAPN2	LOC113146397	ENSMAMP00000026283	ENSMAMP00000029957	Calpain 2, (m/II) large subunit, like; Belongs to the peptidase C2 family.	Talin 2a.	0.854
CAPN2	bax	ENSMAMP00000026283	ENSMAMP00000002417	Calpain 2, (m/II) large subunit, like; Belongs to the peptidase C2 family.	BCL2 associated X, apoptosis regulator a.	0.827
ENSMAMP00000011919	CAPN2	ENSMAMP00000011919	ENSMAMP00000026283	Talin 2b.	Calpain 2, (m/II) large subunit, like; Belongs to the peptidase C2 family.	0.854
ENSMAMP00000011919	ENSMAMP00000029240	ENSMAMP00000011919	ENSMAMP00000029240	Talin 2b.	Uncharacterized protein; Belongs to the peptidase C2 family.	0.866
ENSMAMP00000011919	LOC113124267	ENSMAMP00000011919	ENSMAMP00000029550	Talin 2b.	Talin 1.	0.844
ENSMAMP00000011919	LOC113140156	ENSMAMP00000011919	ENSMAMP00000026379	Talin 2b.	Calpain 2, (m/II) large subunit b; Belongs to the peptidase C2 family.	0.854
ENSMAMP00000011919	LOC113146397	ENSMAMP00000011919	ENSMAMP00000029957	Talin 2b.	Talin 2a.	0.842
ENSMAMP00000028052	CAPN2	ENSMAMP00000028052	ENSMAMP00000026283	Uncharacterized protein.	Calpain 2, (m/II) large subunit, like; Belongs to the peptidase C2 family.	0.832
ENSMAMP00000028052	ENSMAMP00000029240	ENSMAMP00000028052	ENSMAMP00000029240	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C2 family.	0.852
ENSMAMP00000028052	LOC113140156	ENSMAMP00000028052	ENSMAMP00000026379	Uncharacterized protein.	Calpain 2, (m/II) large subunit b; Belongs to the peptidase C2 family.	0.832
ENSMAMP00000028056	CAPN2	ENSMAMP00000028056	ENSMAMP00000026283	Uncharacterized protein.	Calpain 2, (m/II) large subunit, like; Belongs to the peptidase C2 family.	0.832
ENSMAMP00000028056	ENSMAMP00000029240	ENSMAMP00000028056	ENSMAMP00000029240	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C2 family.	0.852
ENSMAMP00000028056	LOC113140156	ENSMAMP00000028056	ENSMAMP00000026379	Uncharacterized protein.	Calpain 2, (m/II) large subunit b; Belongs to the peptidase C2 family.	0.832