STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMAMP00000030398Transcriptional adaptor 3 (NGG1 homolog, yeast)-like. (367 aa)    
Predicted Functional Partners:
LOC113143161
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.999
tada2a
Transcriptional adapter.
    
 0.998
sgf29
SAGA complex associated factor 29.
    
 0.997
taf6
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.996
supt3h
SPT3 homolog, SAGA and STAGA complex component.
    
 0.996
trrap
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.995
taf10
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.995
tada2b
Transcriptional adapter.
    
 0.992
ENSMAMP00000010386
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.988
supt20h
SPT20 homolog, SAGA complex component.
    
 0.986
Your Current Organism:
Mastacembelus armatus
NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel
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