STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO67_21450Uncharacterized protein. (133 aa)    
Predicted Functional Partners:
ATO67_21455
Head-tail adaptor protein.
 
 
   0.994
ATO67_21445
Phage tail protein.
 
 
   0.992
ATO67_21460
Uncharacterized protein.
 
 
   0.991
ATO67_21430
Glycoside hydrolase family 24.
 
   0.978
ATO67_21465
Capsid protein.
 
 
   0.976
ATO67_21425
Beta tubulin.
 
 
   0.973
ATO67_21415
Uncharacterized protein.
 
 
   0.972
ATO67_21480
Portal protein.
 
 
   0.970
ATO67_21440
Uncharacterized protein.
 
     0.920
ATO67_03330
Glycosyl transferase family 1.
    
   0.905
Your Current Organism:
Agrobacterium bohemicum
NCBI taxonomy Id: 2052828
Other names: A. bohemicum, Agrobacterium sp. R89-1, Agrobacterium sp. R90, CCM 8736, DSM 104667, strain R90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.