Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANY21760.1Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)    
Predicted Functional Partners:
ANY21965.1
Penicillin amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.900
ANY21761.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
 
   
 0.874
ANY21759.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.603
ANY21762.1
Epoxide hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.576
ANY25178.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.493
ANY26158.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.466
ANY22779.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.448
ANY23924.1
Guanine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.448
ANY25034.1
Hydroxyatrazine ethylaminohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.448
ANY25037.1
Cytosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.448
Your Current Organism:
Gordonia terrae
NCBI taxonomy Id: 2055
Other names: ATCC 25594, CCUG 34959, CIP 104295, DSM 43249, G. terrae, Gordona terrae, Gordonia sp. IIPN1, Gordonia terrae K, JCM 3206, JCM 3229, LMG 5369, LMG:5369, Methylobacteriaceae bacterium GB31, Methylobacteriaceae bacterium GX1, Methylobacteriaceae bacterium ST1, NBRC 100016, NCTC 10669, NRRL B-16283, Rhodococcus terrae, Rothia sp. K, strain 3612
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