EVG20_g11172 protein (Dentipellis fragilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EVG20_g11172

Uncharacterized protein. (890 aa)

Predicted Functional Partners:

EVG20_g4392

0.758

EVG20_g2496

0.688

EVG20_g3547

0.599

EVG20_g9948

0.493

EVG20_g2791

0.427

EVG20_g6857

0.420

EVG20_g3807

0.407

Your Current Organism:

Dentipellis fragilis

NCBI taxonomy Id: 205917
Other names: D. fragilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EVG20_g11172	EVG20_g2496	A0A4Y9XNZ4	A0A4Y9Z9L7	Uncharacterized protein.	Sister chromatid cohesion protein.	0.688
EVG20_g11172	EVG20_g2791	A0A4Y9XNZ4	A0A4Y9Z636	Uncharacterized protein.	Uncharacterized protein.	0.427
EVG20_g11172	EVG20_g3547	A0A4Y9XNZ4	A0A4Y9Z3J2	Uncharacterized protein.	Uncharacterized protein.	0.599
EVG20_g11172	EVG20_g3807	A0A4Y9XNZ4	A0A4Y9YZJ9	Uncharacterized protein.	CID domain-containing protein.	0.407
EVG20_g11172	EVG20_g4392	A0A4Y9XNZ4	A0A4Y9YYF3	Uncharacterized protein.	Uncharacterized protein.	0.758
EVG20_g11172	EVG20_g6857	A0A4Y9XNZ4	A0A4Y9YHG6	Uncharacterized protein.	Uncharacterized protein.	0.420
EVG20_g11172	EVG20_g9948	A0A4Y9XNZ4	A0A4Y9XXG6	Uncharacterized protein.	Uncharacterized protein.	0.493
EVG20_g2496	EVG20_g11172	A0A4Y9Z9L7	A0A4Y9XNZ4	Sister chromatid cohesion protein.	Uncharacterized protein.	0.688
EVG20_g2496	EVG20_g3547	A0A4Y9Z9L7	A0A4Y9Z3J2	Sister chromatid cohesion protein.	Uncharacterized protein.	0.966
EVG20_g2496	EVG20_g4392	A0A4Y9Z9L7	A0A4Y9YYF3	Sister chromatid cohesion protein.	Uncharacterized protein.	0.551
EVG20_g2496	EVG20_g9948	A0A4Y9Z9L7	A0A4Y9XXG6	Sister chromatid cohesion protein.	Uncharacterized protein.	0.487
EVG20_g2791	EVG20_g11172	A0A4Y9Z636	A0A4Y9XNZ4	Uncharacterized protein.	Uncharacterized protein.	0.427
EVG20_g2791	EVG20_g3547	A0A4Y9Z636	A0A4Y9Z3J2	Uncharacterized protein.	Uncharacterized protein.	0.410
EVG20_g2791	EVG20_g4392	A0A4Y9Z636	A0A4Y9YYF3	Uncharacterized protein.	Uncharacterized protein.	0.439
EVG20_g3547	EVG20_g11172	A0A4Y9Z3J2	A0A4Y9XNZ4	Uncharacterized protein.	Uncharacterized protein.	0.599
EVG20_g3547	EVG20_g2496	A0A4Y9Z3J2	A0A4Y9Z9L7	Uncharacterized protein.	Sister chromatid cohesion protein.	0.966
EVG20_g3547	EVG20_g2791	A0A4Y9Z3J2	A0A4Y9Z636	Uncharacterized protein.	Uncharacterized protein.	0.410
EVG20_g3547	EVG20_g4392	A0A4Y9Z3J2	A0A4Y9YYF3	Uncharacterized protein.	Uncharacterized protein.	0.490
EVG20_g3547	EVG20_g6857	A0A4Y9Z3J2	A0A4Y9YHG6	Uncharacterized protein.	Uncharacterized protein.	0.924
EVG20_g3547	EVG20_g9948	A0A4Y9Z3J2	A0A4Y9XXG6	Uncharacterized protein.	Uncharacterized protein.	0.456