STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVG20_g9731Uncharacterized protein. (576 aa)    
Predicted Functional Partners:
EVG20_g7719
Uncharacterized protein.
 
 0.998
EVG20_g2070
AHS1 domain-containing protein.
   
 0.942
EVG20_g1144
Uncharacterized protein.
  
 0.915
EVG20_g1590
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.874
EVG20_g8681
Thiolase_C domain-containing protein.
    
 0.829
EVG20_g9500
Uncharacterized protein.
    
 0.810
EVG20_g219
Uncharacterized protein.
   
  0.803
EVG20_g2475
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
   
 0.798
EVG20_g2956
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.795
EVG20_g205
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.789
Your Current Organism:
Dentipellis fragilis
NCBI taxonomy Id: 205917
Other names: D. fragilis
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