STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVG20_g9462Uncharacterized protein. (949 aa)    
Predicted Functional Partners:
EVG20_g1626
Uncharacterized protein.
    
 0.950
EVG20_g5837
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.881
EVG20_g8641
Peptidase_M48 domain-containing protein.
    
 0.864
EVG20_g7087
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
   0.680
EVG20_g8786
Uncharacterized protein.
    
 0.673
EVG20_g7255
Uncharacterized protein.
    
 0.673
EVG20_g5294
Uncharacterized protein.
    
 0.673
EVG20_g90
Uncharacterized protein.
    
 0.673
EVG20_g6980
Rhodanese domain-containing protein.
     
 0.595
EVG20_g3595
Rhodanese domain-containing protein.
     
 0.595
Your Current Organism:
Dentipellis fragilis
NCBI taxonomy Id: 205917
Other names: D. fragilis
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