STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVG20_g7311AA_TRNA_LIGASE_II domain-containing protein. (872 aa)    
Predicted Functional Partners:
SLX1
Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA.
   
 0.979
EVG20_g4749
ERCC4 domain-containing protein.
   
 0.976
EVG20_g3256
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
 
 0.961
EVG20_g8642
Uncharacterized protein.
   
 0.956
EVG20_g3613
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.956
EVG20_g6233
Amidase domain-containing protein.
  
 0.897
EVG20_g9451
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.875
EVG20_g7577
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 
0.852
EVG20_g5533
Uncharacterized protein.
  
 0.847
EVG20_g5142
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.825
Your Current Organism:
Dentipellis fragilis
NCBI taxonomy Id: 205917
Other names: D. fragilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.