STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVG20_g6592Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis. (1011 aa)    
Predicted Functional Partners:
EVG20_g3156
Iso_dh domain-containing protein.
 
 0.946
EVG20_g2314
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
   
 
 
0.902
EVG20_g4036
Citrate synthase; Belongs to the citrate synthase family.
  
 0.870
EVG20_g2595
Citrate synthase; Belongs to the citrate synthase family.
  
 0.870
EVG20_g967
Citrate synthase; Belongs to the citrate synthase family.
  
 0.870
EVG20_g6913
Uncharacterized protein.
  
 0.866
EVG20_g3091
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.866
EVG20_g5998
Iso_dh domain-containing protein.
  
 0.807
EVG20_g1018
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 
 0.773
EVG20_g6533
Malate synthase; Belongs to the malate synthase family.
   
 0.771
Your Current Organism:
Dentipellis fragilis
NCBI taxonomy Id: 205917
Other names: D. fragilis
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