STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVG20_g6071alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (1498 aa)    
Predicted Functional Partners:
EVG20_g5302
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 0.940
EVG20_g8111
PCI domain-containing protein.
   
 0.926
EVG20_g7645
VWFA domain-containing protein.
   
 0.925
EVG20_g11047
PCI domain-containing protein.
   
 0.912
EVG20_g8176
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.911
EVG20_g3208
PCI domain-containing protein.
   
 0.911
EVG20_g9274
Uncharacterized protein.
   
 0.908
EVG20_g3183
IBB domain-containing protein.
   
 0.907
EVG20_g6833
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.898
EVG20_g251
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
   
 0.898
Your Current Organism:
Dentipellis fragilis
NCBI taxonomy Id: 205917
Other names: D. fragilis
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