STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVG20_g5087Uncharacterized protein. (409 aa)    
Predicted Functional Partners:
EVG20_g8983
Uncharacterized protein.
    
 0.806
EVG20_g11294
Uncharacterized protein.
   
 0.784
EVG20_g8421
Ribonuclease P protein subunit.
    
 0.778
EVG20_g3505
Uncharacterized protein.
    
 0.743
EVG20_g9175
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.732
EVG20_g10119
S4 RNA-binding domain-containing protein.
   
 
  0.586
EVG20_g10391
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
 
  0.584
EVG20_g7419
S4 RNA-binding domain-containing protein.
   
 
  0.584
EVG20_g10177
Uncharacterized protein.
   
 
  0.575
EVG20_g9398
Uncharacterized protein.
    
 0.575
Your Current Organism:
Dentipellis fragilis
NCBI taxonomy Id: 205917
Other names: D. fragilis
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