STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVG20_g5474HTH TFE/IIEalpha-type domain-containing protein. (895 aa)    
Predicted Functional Partners:
EVG20_g5883
TFIIE beta domain-containing protein.
   
 0.999
EVG20_g7280
Uncharacterized protein.
   
 0.996
EVG20_g1057
BSD domain-containing protein.
   
 0.996
EVG20_g10010
VWFA domain-containing protein.
   
 0.995
EVG20_g570
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
   
 0.995
EVG20_g9614
Uncharacterized protein.
   
 0.994
EVG20_g8239
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.994
EVG20_g7289
Helicase ATP-binding domain-containing protein.
    
 0.994
EVG20_g2473
RING-type domain-containing protein.
    
 0.994
EVG20_g1090
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.993
Your Current Organism:
Dentipellis fragilis
NCBI taxonomy Id: 205917
Other names: D. fragilis
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