STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIA1Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor. (329 aa)    
Predicted Functional Partners:
EVG20_g9620
eIF-5a domain-containing protein.
  
 0.997
EVG20_g8999
Uncharacterized protein.
   
 0.881
EVG20_g1642
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 
 0.854
EVG20_g6816
Triosephosphate isomerase.
     
 0.809
EVG20_g4484
Fe-S_biosyn domain-containing protein.
    
 
 0.784
EVG20_g8213
BUD22 domain-containing protein.
   
 
  0.780
EVG20_g178
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
   
 
 0.773
EVG20_g9265
Gp_dh_N domain-containing protein.
     
 0.770
EVG20_g601
WD_REPEATS_REGION domain-containing protein.
   
    0.769
EVG20_g361
RNA helicase.
   
    0.768
Your Current Organism:
Dentipellis fragilis
NCBI taxonomy Id: 205917
Other names: D. fragilis
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