STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVG20_g4064Uncharacterized protein. (304 aa)    
Predicted Functional Partners:
EVG20_g1119
Uncharacterized protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
   
 0.996
EVG20_g2680
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 
 0.976
EVG20_g3318
Uncharacterized protein.
    
 0.973
EVG20_g613
Nuclear cap-binding protein subunit 2.
    
 
 0.969
EVG20_g10414
Matrin-type domain-containing protein.
    
 0.964
EVG20_g759
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.942
EVG20_g2543
Uncharacterized protein.
    
 0.938
EVG20_g998
Uncharacterized protein.
   
 
 0.937
EVG20_g704
Sm domain-containing protein.
    
 0.934
EVG20_g4405
CPSF_A domain-containing protein.
    
 0.933
Your Current Organism:
Dentipellis fragilis
NCBI taxonomy Id: 205917
Other names: D. fragilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.