EVG20_g3730 protein (Dentipellis fragilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EVG20_g3730

Uncharacterized protein. (371 aa)

Predicted Functional Partners:

EVG20_g6811

0.887

EVG20_g2043

0.887

EVG20_g2242

0.822

EVG20_g3718

0.818

EVG20_g10040

0.805

EVG20_g10387

0.805

EVG20_g9365

0.805

EVG20_g9056

0.805

EVG20_g8365

0.805

EVG20_g7458

0.805

Your Current Organism:

Dentipellis fragilis

NCBI taxonomy Id: 205917
Other names: D. fragilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EVG20_g10040	EVG20_g3718	A0A4Y9XU78	A0A4Y9Z207	Protein kinase domain-containing protein.	SH3 domain-containing protein.	0.553
EVG20_g10040	EVG20_g3730	A0A4Y9XU78	A0A4Y9Z213	Protein kinase domain-containing protein.	Uncharacterized protein.	0.805
EVG20_g10040	EVG20_g7458	A0A4Y9XU78	A0A4Y9YE87	Protein kinase domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.623
EVG20_g10040	EVG20_g8365	A0A4Y9XU78	A0A4Y9Y8J7	Protein kinase domain-containing protein.	Mitogen-activated protein kinase.	0.624
EVG20_g10040	EVG20_g9056	A0A4Y9XU78	A0A4Y9Y3E2	Protein kinase domain-containing protein.	Uncharacterized protein.	0.475
EVG20_g10040	EVG20_g9365	A0A4Y9XU78	A0A4Y9XYI5	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.539
EVG20_g10387	EVG20_g3718	A0A4Y9XUJ8	A0A4Y9Z207	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	SH3 domain-containing protein.	0.553
EVG20_g10387	EVG20_g3730	A0A4Y9XUJ8	A0A4Y9Z213	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Uncharacterized protein.	0.805
EVG20_g10387	EVG20_g7458	A0A4Y9XUJ8	A0A4Y9YE87	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.620
EVG20_g10387	EVG20_g8365	A0A4Y9XUJ8	A0A4Y9Y8J7	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mitogen-activated protein kinase.	0.626
EVG20_g10387	EVG20_g9056	A0A4Y9XUJ8	A0A4Y9Y3E2	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Uncharacterized protein.	0.475
EVG20_g10387	EVG20_g9365	A0A4Y9XUJ8	A0A4Y9XYI5	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Protein kinase domain-containing protein.	0.519
EVG20_g2043	EVG20_g3718	A0A4Y9Z9Y0	A0A4Y9Z207	PH domain-containing protein.	SH3 domain-containing protein.	0.854
EVG20_g2043	EVG20_g3730	A0A4Y9Z9Y0	A0A4Y9Z213	PH domain-containing protein.	Uncharacterized protein.	0.887
EVG20_g2242	EVG20_g3730	A0A4Y9Z8J8	A0A4Y9Z213	Ras-GEF domain-containing protein.	Uncharacterized protein.	0.822
EVG20_g3718	EVG20_g10040	A0A4Y9Z207	A0A4Y9XU78	SH3 domain-containing protein.	Protein kinase domain-containing protein.	0.553
EVG20_g3718	EVG20_g10387	A0A4Y9Z207	A0A4Y9XUJ8	SH3 domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.553
EVG20_g3718	EVG20_g2043	A0A4Y9Z207	A0A4Y9Z9Y0	SH3 domain-containing protein.	PH domain-containing protein.	0.854
EVG20_g3718	EVG20_g3730	A0A4Y9Z207	A0A4Y9Z213	SH3 domain-containing protein.	Uncharacterized protein.	0.818
EVG20_g3718	EVG20_g6811	A0A4Y9Z207	A0A4Y9YHU8	SH3 domain-containing protein.	Uncharacterized protein.	0.854