STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVG20_g3351Uncharacterized protein; Belongs to the methyltransferase superfamily. METTL16/RlmF family. (330 aa)    
Predicted Functional Partners:
EVG20_g5583
Uncharacterized protein.
 
      0.871
EVG20_g99
Bin3-type SAM domain-containing protein.
    
 
 0.622
EVG20_g11709
Uncharacterized protein; Belongs to the MT-A70-like family.
   
  
 0.544
EVG20_g7678
Uncharacterized protein.
    
 
 0.543
EVG20_g8231
Uncharacterized protein.
   
  
 0.521
EVG20_g10180
Uncharacterized protein; Belongs to the MT-A70-like family.
   
  
 0.504
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
  
 0.417
EVG20_g9685
G-patch domain-containing protein.
      
 0.416
EVG20_g4936
Glutamine amidotransferase type-1 domain-containing protein.
      
 0.410
EVG20_g5539
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
  
 0.404
Your Current Organism:
Dentipellis fragilis
NCBI taxonomy Id: 205917
Other names: D. fragilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.